Beneficial genetic mutations
How can we understand the concept of beneficial mutations at the genetic level? First, let us examine DNA. DNA is comprised of a phosphate backbone with attached nucleosides. These nucleosides potentially include adenosine, thymine, guanine, and cytosine, and these four form hydrogen bonds between each other that help them to intercalate and allow for the classic DNA double-helix coil.
When a length of DNA with a known sequence of nucleotides (which are nucleosides + their phosphate backbone) has an alteration in a particular (or multiple) nucleotide, this is a mutation. So, for example, if at position 7 in a gene there is meant to be a thymine (T) nucleotide, and instead there appears through an error of DNA replication (usually committed by the enzyme DNA polymerase) a cytosine (C) nucleotide; this is a mutation (Fig. 1). Sometimes a single nucleotide gets switched for another, as in our above example - this is termed a point mutation because the error or switch or mutation occurs at a single point.
Fig. 1: Point mutation. YourGenome.
Sometimes multiple nucleotides in sequence are altered from the original, intended strand; and this collection of alterations can be termed a mutation as well.
Now, how do we know when one of these mutations is beneficial just from looking at its sequence? Well, we cannot. A beneficial mutation is one that confers positive qualities; especially increased fitness, to the organism that has it. Beneficial mutations are not the most common in nature, but when they do occur, they tend to propagate at a higher rate than random through the population. This may be due to natural selection.
Beneficial mutations in humans
Now that we understand what beneficial mutations are on a genetic level, let's dig deeper and discover some beneficial mutations that exist in our world. We will look specifically at beneficial mutations in humans. Some of these include:
Lactose tolerance:
Would you believe that your ability (if you have it, as large swathes of the world's population are lactose intolerant) to happily imbibe milk, ice cream, and cheeses while remaining gas free is a mutation? Yes, generally humans are lactose tolerant when they are born, so they can easily derive calories and nutrients from their mother's milk (which contains lactose). However, rather quickly as we age, we naturally lose our lactose tolerance and become lactose-intolerant. The current scientific theory behind how some of us are able to freely drink milk and remain lactose-tolerant into our old age is thus:
Lactose tolerance is naturally relatively high in certain populations that have access to large amounts of milk: whether from cows, goats, or sheep - as was seen in most of Europe, more nomadic tribes of Africa, as well as parts of Asia and the Middle East. In ancient times, milk was (and still is) a vast treasure trove of calories, nutrients, and vitamins that was very important to our scavenging and subsistence farming ancestors. Those who could digest milk (lactose tolerant or, as scientists call them, lactase persistent, because the digestive enzyme lactase remains active in them past their babyhood) were less likely to be hungry, vitamin deficient, and malnourished. Thus, they were more likely to survive to adulthood and more likely to reproduce, thus increasing the percentage of the populations with their gene for lactose tolerance or lactase-persistence.
On a genetic level, the mutation for lactose tolerance is a mere point mutation. The cytosine nucleotide which is considered normal, or wild-type; is switched with the thymine nucleotide.
More beneficial mutations examples
Disease: Malaria
Mutation: Hemoglobin C mutation
Population: In certain populations of Sub-Saharan Africa where malaria was historically a major threat to wellbeing and survival (especially of children), there are higher rates of mutated hemoglobin - leading to hemoglobin C. Those with hemoglobin C are much less susceptible to malaria, thus this is a beneficial mutation in those populations.
Disease: HIV
Mutation: CCR5 (an HIV receptor)
Population: In certain people with North European ancestry there has been found a mutated CCR5 gene, that leads to a complete inability for HIV to bind to their cells. These people are completely resistant to HIV, which is a very beneficial mutation.
Disease: Heart disease (like heart attacks, stiff heart valves, clogged arteries, etc.)
Mutation: Apolipoprotein A-I Milano (apolipoproteins help move cholesterol to and from our liver, clearing it from our blood)
Population: In certain townships of Italy, some people have a mutated Apolipoprotein A-I. This mutation leads to more efficient clearing of cholesterol from the blood, reducing the risk of cardiovascular disease.
Beneficial mutations in animals and microorganisms
- Animal: Cows
- Mutation: Murray Gray coloring and increased fitness.
- Effects: Cows who randomly mutated this coloring were shown to have greater fertility and higher numbers of progeny.
- Organism: Bacteria
- Mutation: Antibiotic resistance.
- Effects: Bacteria can survive certain antibiotics when they develop resistance to them through mutations. This helps them to persist even when medications are applied.
- Animal: Fish
- Mutation: Antifreeze proteins (AFP).
- Effects: These mutations exist in fish that live in extremely cold climates. The mutation appears to be a duplication of the existing antifreeze gene, and it helps the fish to be hardier in the waters of the Arctic.
Fig. 2: Antifreeze fish. The Atlanti.
List of features of beneficial mutations
1. Beneficial mutations do not occur at higher rates just because they are beneficial. Mutations occur at random, and most are not beneficial but are either deleterious (harmful) or silent (no effect).
2. Beneficial mutations, like all mutations, can be due to a single alteration of a nucleotide (point mutation) or due to alterations of larger swathes of DNA.
3. Beneficial mutations are defined by their ability to increase survival, reproductive capacity, and/or competitive advantage.
4. Beneficial mutations tend to spread at higher rates than random in a population - this is due to natural selection.
Beneficial Mutations - Key takeaways
- Beneficial mutations are defined as those that increase the fitness, survival, and competitive advantage of species.
- Beneficial mutations can range from single nucleotide point mutations to alterations of large swathes of DNA.
- Beneficial mutations can help humans prevent disease and damage - such as mutations that make us more impervious to diabetes, heart disease, and bone breakage.
- Animals and microorganisms also exhibit some beneficial mutations, including genes for antibiotic resistance, increased fitness, and greater ability to withstand cold temperatures.
References
- Williams, S. C. (2016). Genetic mutations you want. Proceedings of the National Academy of Sciences, 113(10), 2554–2557. https://doi.org/10.1073/pnas.1601663113
- Lee, A. (2011, October 11). 4 beneficial evolutionary mutations that humans are undergoing right now. Big Think. https://bigthink.com/surprising-science/evolution-is-still-happening-beneficial-mutations-in-humans/
- Purdom, D. G. (2020, July 11). Beneficial mutations. Answers in Genesis. https://answersingenesis.org/genetics/epigenetics/what-about-beneficial-mutations/
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